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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43196028_43197031_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43196028 - 43197031

Intron Length:

1004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGTC

5'SS Class:

strong_major

3'SS Sequence:

TATCTTATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TGCTCTTTGATT

Flanking Amino Acid:

TPVQQILTNSGQILQVVRTA

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

1.1

79.6

34.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

83.2

0.75

0.8

77.2

35.4

Minor 5ss

42.8

-0.8

3.2

61.1

43.8

Minor BPS

70.9

0.74

1.2

79.21

37.5

Associated Gene:

Gene:

GTF2A1

Ensembl Gene ID:

ENSAPLG00000002573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002634

43186992 - 43210684

23693