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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43199223_43201572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43199223 - 43201572

Intron Length:

2350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGACTT

5'SS Class:

major

3'SS Sequence:

TTTCTGATTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATGAAAT

Flanking Amino Acid:

QQVLIPTSQQAPQQQVIVPD

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.3

75.5

40.6

Major BPS

100

1.24

0.5

100

Major PPT

80.2

0.68

0.8

78.3

34.8

Minor 5ss

33.3

-1.9

3.2

48.4

47.1

Minor BPS

65.5

0.57

1.8

88.14

35.9

Associated Gene:

Gene:

GTF2A1

Ensembl Gene ID:

ENSAPLG00000002573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002634

43186992 - 43210684

23693