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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43203624_43210654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43203624 - 43210654

Intron Length:

7031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

MASSTNTNPVPKLYRSVIED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

72.2

37.2

Major BPS

71.2

0.53

70.3

31.9

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

33.7

-1.9

3.1

41.4

39.1

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

GTF2A1

Ensembl Gene ID:

ENSAPLG00000002573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002634

43186992 - 43210684

23693