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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4323415_4326916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4323415 - 4326916

Intron Length:

3502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCCTG

5'SS Class:

major

3'SS Sequence:

TCTAATGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATCTGAAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

57.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

72.7

0.51

65.6

40.6

Minor 5ss

43.7

-0.7

3.1

62.3

Minor BPS

49.8

0.07

2.3

75.99

41.5

Associated Gene:

Gene:

PLEKHA7

Ensembl Gene ID:

ENSAPLG00000008901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035209

4191041 - 4327076

136036

ENSAPLT00000032075

4192752 - 4327076

134325