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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43241969_43281319_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43241969 - 43281319

Intron Length:

39351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAG

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

SGGTSAADSADNSSSLQEDE

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

62.5

42.3

Major BPS

0.08

1.6

43.5

Major PPT

83.6

0.76

0.9

85.6

26.3

Minor 5ss

-2.3

3.3

35.2

43.3

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

STON2

Ensembl Gene ID:

ENSAPLG00000003219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003282

43232430 - 43288692

56263