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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43318555_43320210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43318555 - 43320210

Intron Length:

1656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTAACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

ATTTTCTTAACT

Flanking Amino Acid:

MHEKGLGIKQDIHLAKRFYD

Intron Amino Acid Position:

688

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

82.2

0.8

71.9

35.8

Major PPT

76.5

0.6

0.8

71.6

33.1

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

89.7

1.32

0.8

98.16

24.3

Associated Gene:

Gene:

SEL1L

Ensembl Gene ID:

ENSAPLG00000003250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003367

43317454 - 43337201

19748

ENSAPLT00000041626

43317454 - 43337201

19748