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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43325942_43326864_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43325942 - 43326864

Intron Length:

923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTTTT

5'SS Class:

major

3'SS Sequence:

TTCCTTTCTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

GGTTGCTAAAAT

Flanking Amino Acid:

GGRGVEQNHQRAFEYFNQAA

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.2

78.8

38.3

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

84.1

0.77

0.7

80.1

25.5

Minor 5ss

51.1

0.04

2.9

75.5

40.6

Minor BPS

0.01

2.2

70.87

45.4

Associated Gene:

Gene:

SEL1L

Ensembl Gene ID:

ENSAPLG00000003250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003367

43317454 - 43337201

19748

ENSAPLT00000041626

43317454 - 43337201

19748