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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43328187_43328782_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43328187 - 43328782

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

CTTTTCGTATTT

Flanking Amino Acid:

GGNLIAHMILGYRYWAGIGV

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.6

41.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

85.2

0.79

0.7

78.2

35.7

Minor 5ss

38.9

-1.3

2.9

45.6

43.8

Minor BPS

49.6

0.05

2.2

74.56

43.3

Associated Gene:

Gene:

SEL1L

Ensembl Gene ID:

ENSAPLG00000003250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003367

43317454 - 43337201

19748