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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43350236_43350762_R

Intron Information:

Intron Rank:

132120

Intron Class:

major

Intron Phase:

Intron Coordinates:

43350236 - 43350762

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTTCC

5'SS Class:

major

3'SS Sequence:

CTTATTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTTTCTTTACTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

68.5

37.5

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

88.8

0.87

0.7

84.1

30.7

Minor 5ss

47.1

-0.3

2.4

53.9

43.4

Minor BPS

0.46

1.6

74.65

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023359

43345736 - 43350865

5130