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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43374463_43436266_F

Intron Information:

Intron Rank:

136440

Intron Class:

major

Intron Phase:

Intron Coordinates:

43374463 - 43436266

Intron Length:

61804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

ATTTATTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

69.7

43.7

Major BPS

81.6

0.78

0.8

24.9

Major PPT

78.5

0.64

0.9

74.5

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

0.24

1.7

68.23

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021915

43374203 - 43497962

123760