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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43395556_43396234_F

Intron Information:

Intron Rank:

144001

Intron Class:

major

Intron Phase:

Intron Coordinates:

43395556 - 43396234

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTATGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

CTTCCCTTTATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

36.3

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

80.3

0.68

0.8

76.3

31.2

Minor 5ss

37.4

-1.4

44.6

45.1

Minor BPS

59.8

0.16

1.7

64.88

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037836

43391926 - 43396522

4597