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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43492868_43496741_F

Intron Information:

Intron Rank:

136442

Intron Class:

major

Intron Phase:

Intron Coordinates:

43492868 - 43496741

Intron Length:

3874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ACCTACCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

CTTTTCTGTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

70.3

0.46

0.9

61.8

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

60.1

0.4

1.8

80.3

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021915

43374203 - 43497962

123760