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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43563453_43577585_F

Intron Information:

Intron Rank:

130902

Intron Class:

major

Intron Phase:

Intron Coordinates:

43563453 - 43577585

Intron Length:

14133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTGGT

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTTTTCCTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

72.2

39.5

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

93.2

0.97

0.6

88.6

21.1

Minor 5ss

34.5

-1.8

3.3

49.7

46.6

Minor BPS

-0.2

2.1

64.91

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026814

43563121 - 43612486

49366