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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4357485_4358182_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4357485 - 4358182

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

TCTCTCTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

TTTTTCTCTCTT

Flanking Amino Acid:

TKRVLPPNWKYESSTASALV

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

70.8

39.2

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

85.6

0.8

0.6

84.6

23.1

Minor 5ss

38.7

-1.3

53.5

38.2

Minor BPS

40.3

-0.6

3.6

75.38

41.7

Associated Gene:

Gene:

RPS13

Ensembl Gene ID:

ENSAPLG00000011983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012496

4357391 - 4360812

3422