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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43575679_43577585_F

Intron Information:

Intron Rank:

130907

Intron Class:

major

Intron Phase:

Intron Coordinates:

43575679 - 43577585

Intron Length:

1907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTTTTCCTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.8

43.8

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

93.2

0.97

0.6

88.6

21.1

Minor 5ss

29.2

-2.4

2.5

25.2

36.6

Minor BPS

-0.2

2.1

64.91

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027595

43575536 - 43612135

36600