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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43577730_43606728_F

Intron Information:

Intron Rank:

130903

Intron Class:

major

Intron Phase:

Intron Coordinates:

43577730 - 43606728

Intron Length:

28999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTATA

5'SS Class:

strong_major

3'SS Sequence:

TTGTACCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TTCTTTGTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

85.1

25.9

Major BPS

75.8

0.64

65.8

Major PPT

79.6

0.67

0.9

70.3

Minor 5ss

33.9

-1.8

2.8

42.4

44.3

Minor BPS

48.9

-0

2.2

74.22

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027595

43575536 - 43612135

36600

ENSAPLT00000026814

43563121 - 43612486

49366