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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4358718_4359464_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4358718 - 4359464

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGTTC

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TTTCTCTTCAGT

Flanking Amino Acid:

AKKGLTPSQIGVILRDSHGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

75.7

34.8

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

80.1

0.68

77.4

41.2

Minor 5ss

41.4

-1

3.3

55.7

43.3

Minor BPS

56.5

0.29

2.1

80.65

41.4

Associated Gene:

Gene:

RPS13

Ensembl Gene ID:

ENSAPLG00000011983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012496

4357391 - 4360812

3422