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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4359544_4360617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4359544 - 4360617

Intron Length:

1074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TAATTTTCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTTTCCTAATT

Flanking Amino Acid:

ALPYRRSVPTWLKLTSDDVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.2

Major BPS

81.9

0.79

0.9

80.1

Major PPT

79.6

0.67

0.8

78.4

35.6

Minor 5ss

33.1

-1.9

3.2

43.9

43.7

Minor BPS

74.5

0.85

1.6

92.26

Associated Gene:

Gene:

RPS13

Ensembl Gene ID:

ENSAPLG00000011983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012496

4357391 - 4360812

3422