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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43598793_43599958_R

Intron Information:

Intron Rank:

152567

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

43598793 - 43599958

Intron Length:

1166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCATGAAGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTGCAT

U12 Branch Point Sequence:

CTTGCATGAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

62.7

0.32

1.4

39.9

Major PPT

0.14

1.1

52.2

41.5

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

47.5

-0.1

2.1

69.74

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047443

43590680 - 43603841

13162

ENSAPLT00000018614

43590961 - 43603841

12881