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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43648420_43650577_F

Intron Information:

Intron Rank:

140629

Intron Class:

major

Intron Phase:

Intron Coordinates:

43648420 - 43650577

Intron Length:

2158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTGTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TCTACATGAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

86.1

24.6

Major BPS

70.2

0.5

1.1

77.2

Major PPT

87.7

0.85

0.8

84.5

30.4

Minor 5ss

46.2

-0.4

2.8

62.8

Minor BPS

47.3

-0.2

61.33

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042927

43648089 - 43662240

14152