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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4365235_4366744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4365235 - 4366744

Intron Length:

1510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TGTTTCTGACAG

Flanking Amino Acid:

QKRYNPDKHYIYVVRVLREG

Intron Amino Acid Position:

1454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

83.8

34.5

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

72.9

0.52

1.1

68.8

42.1

Minor 5ss

41.8

-0.9

2.8

56.1

41.3

Minor BPS

48.1

-0.2

1.9

58.04

43.2

Associated Gene:

Gene:

PIK3C2A

Ensembl Gene ID:

ENSAPLG00000010801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039952

4362586 - 4396342

33757

ENSAPLT00000011327

4362586 - 4396342

33757