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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43652402_43660750_F

Intron Information:

Intron Rank:

140631

Intron Class:

major

Intron Phase:

Intron Coordinates:

43652402 - 43660750

Intron Length:

8349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTATCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

ATTCATATAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

36.6

Major BPS

74.5

0.61

79.6

29.1

Major PPT

77.3

0.61

0.8

70.6

39.9

Minor 5ss

36.7

-1.5

2.6

45.3

42.8

Minor BPS

48.6

-0

1.8

71.66

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042927

43648089 - 43662240

14152