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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4367785_4368209_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4367785 - 4368209

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

GAATTTCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TATATTAAAACT

Flanking Amino Acid:

ANLFLNLLSLMLSSGLPELS

Intron Amino Acid Position:

1348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.1

37.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

73.5

0.53

0.9

40.4

Minor 5ss

42.2

-0.9

2.9

56.1

42.2

Minor BPS

47.9

-0

1.9

70.25

40.7

Associated Gene:

Gene:

PIK3C2A

Ensembl Gene ID:

ENSAPLG00000010801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011327

4362586 - 4396342

33757

ENSAPLT00000039952

4362586 - 4396342

33757