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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4373037_4373659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4373037 - 4373659

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCTC

U12 Branch Point Sequence:

CTCTCTCTCTCT

Flanking Amino Acid:

VKQTSVSGRQAALQSGMERV

Intron Amino Acid Position:

1084

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

75.8

35.3

Major BPS

33.6

-1

4.2

71.3

36.7

Major PPT

85.8

0.81

0.7

80.7

24.4

Minor 5ss

35.7

-1.6

2.6

42.3

44.5

Minor BPS

35.7

-1

3.6

63.58

Associated Gene:

Gene:

PIK3C2A

Ensembl Gene ID:

ENSAPLG00000010801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011327

4362586 - 4396342

33757

ENSAPLT00000039952

4362586 - 4396342

33757