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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4374616_4375022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4374616 - 4375022

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GATGACTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTGTGATGACT

Flanking Amino Acid:

PLAALELLDSKFADQEVRNT

Intron Amino Acid Position:

960

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

79.7

27.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

65.7

0.35

55.1

45.1

Minor 5ss

34.5

-1.8

40.8

39.4

Minor BPS

46.8

-0.1

2.4

75.3

41.8

Associated Gene:

Gene:

PIK3C2A

Ensembl Gene ID:

ENSAPLG00000010801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039952

4362586 - 4396342

33757

ENSAPLT00000011327

4362586 - 4396342

33757