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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4376848_4379049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4376848 - 4379049

Intron Length:

2202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

GTGACACTAACG

Flanking Amino Acid:

QVSLPLFDFRRLLTCGTKLL

Intron Amino Acid Position:

813

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

85.6

31.2

Major BPS

67.6

0.44

1.2

Major PPT

89.1

0.88

0.6

88.3

21.5

Minor 5ss

40.8

-1

2.8

55.7

41.6

Minor BPS

-0.3

55.42

44.8

Associated Gene:

Gene:

PIK3C2A

Ensembl Gene ID:

ENSAPLG00000010801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039952

4362586 - 4396342

33757

ENSAPLT00000011327

4362586 - 4396342

33757