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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43848931_43851687_R

Intron Information:

Intron Rank:

128905

Intron Class:

major

Intron Phase:

Intron Coordinates:

43848931 - 43851687

Intron Length:

2757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

ATAAGCGAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.9

33.7

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

90.1

0.9

0.6

84.1

30.8

Minor 5ss

27.4

-2.6

2.7

31.6

42.2

Minor BPS

41.7

-0.5

2.5

63.74

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027547

43848088 - 43860747

12660

ENSAPLT00000019522

43848088 - 43860747

12660