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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4386090_4386201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4386090 - 4386201

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAATA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TGGTGTTCAACA

Flanking Amino Acid:

VEKPFREPIIRCSLEELLEV

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

82.7

29.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

89.5

0.89

0.7

85.1

29.3

Minor 5ss

37.1

-1.5

49.4

46.4

Minor BPS

50.1

64.03

42.6

Associated Gene:

Gene:

PIK3C2A

Ensembl Gene ID:

ENSAPLG00000010801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011327

4362586 - 4396342

33757

ENSAPLT00000039952

4362586 - 4396342

33757