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Intron Name: Anas_platyrhynchos_platyrhynchos_5_44242981_44247363_F

Intron Information:

Intron Rank:

126628

Intron Class:

major

Intron Phase:

Intron Coordinates:

44242981 - 44247363

Intron Length:

4383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAC

U12 Branch Point Sequence:

TTTTCCTTTTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

60.5

0.26

1.1

70.3

34.5

Major PPT

100

1.12

0.4

100

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

48.5

-0

3.6

87.87

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026789

44242834 - 44248285

5452

ENSAPLT00000020718

44242834 - 44247559

4726