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Intron Name: Anas_platyrhynchos_platyrhynchos_5_44376801_44390387_F

Intron Information:

Intron Rank:

124228

Intron Class:

major

Intron Phase:

Intron Coordinates:

44376801 - 44390387

Intron Length:

13587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

GTTGTCTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

70.6

41.4

Major BPS

68.1

0.45

58.1

38.5

Major PPT

75.6

0.58

0.9

37.2

Minor 5ss

36.7

-1.5

3.3

50.2

46.4

Minor BPS

47.8

-0.1

2.1

63.67

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032765

44376620 - 44390697

14078