Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_4438757_4439504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4438757 - 4439504

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TCTATATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

ATATCTATATTT

Flanking Amino Acid:

PKDLDMLIKAATSDLENYDK

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

70.1

40.6

Major BPS

80.4

0.76

80.3

31.8

Major PPT

79.9

0.67

0.8

77.8

35.4

Minor 5ss

37.2

-1.4

3.3

55.2

42.1

Minor BPS

51.2

0.12

1.8

72.08

39.1

Associated Gene:

Gene:

NUCB2

Ensembl Gene ID:

ENSAPLG00000010426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010903

4432843 - 4449294

16452