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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4442034_4443586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4442034 - 4443586

Intron Length:

1553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGAATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TACCTTTGAATT

Flanking Amino Acid:

QELEALFTKELEKVYDPKNE

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

78.6

0.64

0.9

74.6

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

53.6

0.19

1.4

66.75

38.3

Associated Gene:

Gene:

NUCB2

Ensembl Gene ID:

ENSAPLG00000010426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010903

4432843 - 4449294

16452