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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4445460_4446669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4445460 - 4446669

Intron Length:

1210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACTTA

5'SS Class:

major

3'SS Sequence:

ATTTTTTCACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

AAGTTTTTAACT

Flanking Amino Acid:

LQAQKQELQQVVKQMEQKKL

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

68.5

39.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

0.7

0.9

75.2

Minor 5ss

45.7

-0.5

3.2

64.5

46.9

Minor BPS

72.6

0.79

1.1

78.87

37.4

Associated Gene:

Gene:

NUCB2

Ensembl Gene ID:

ENSAPLG00000010426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010903

4432843 - 4449294

16452