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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4446752_4448652_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4446752 - 4448652

Intron Length:

1901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTATGTATC

5'SS Class:

weak_major

3'SS Sequence:

TCTTGTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TCTTGTTTTACA

Flanking Amino Acid:

GPAGELKFQPPGEHKVGDAP

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.3

69.2

41.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

88.7

0.87

0.7

83.2

31.9

Minor 5ss

48.2

-0.2

2.4

67.5

36.5

Minor BPS

0.15

2.1

70.62

41.9

Associated Gene:

Gene:

NUCB2

Ensembl Gene ID:

ENSAPLG00000010426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010903

4432843 - 4449294

16452