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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4487557_4488801_R


Intron Information:

Intron Rank:
28

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4487557 - 4488801

Intron Length:
1245

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAGGGCA

5'SS Class:
strong_major

3'SS Sequence:
TAACCCTTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
ATTTTCATAACC

Flanking Amino Acid:
FIQKYFRVASRDLQQLDDST

Intron Amino Acid Position:
1199

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80
0.71
1
67.1
38.4

Major BPS
100
1.24
0.5
100
0

Major PPT
75.4
0.57
0.9
65.9
40.3

Minor 5ss
30
-2.3
3.5
39.6
45.9

Minor BPS
71.8
0.66
1.5
81.62
31.7

Associated Gene:

Gene:
ABCC8

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4472915 - 4546067
73153

4472915 - 4546067
73153

4472915 - 4546067
73153