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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4499398_4500260_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4499398 - 4500260

Intron Length:
863

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAACAGGT

5'SS Class:
major

3'SS Sequence:
TTTGTTTCCGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTGGAT

U12 Branch Point Sequence:
TTTGTGTTACCT

Flanking Amino Acid:
ITFESSFNKQRYKAVIDACS

Intron Amino Acid Position:
810

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.2
0.64
1.1
69.9
41.1

Major BPS
56.3
0.16
1.5
57.1
49.4

Major PPT
85
0.79
0.8
80.9
31.1

Minor 5ss
37.7
-1.4
3.5
56.6
47.5

Minor BPS
49.8
0.07
2.4
78.66
44.1

Associated Gene:

Gene:
ABCC8

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4472915 - 4546067
73153

4472915 - 4546067
73153

4472915 - 4546067
73153

4472915 - 4546067
73153