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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4500360_4503229_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4500360 - 4503229

Intron Length:
2870

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATAACTC

5'SS Class:
major

3'SS Sequence:
TTTGTTTTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTAAG

U12 Branch Point Sequence:
AAGCTGGGAACT

Flanking Amino Acid:
EKESPVEMEFRKRGSVAYAS

Intron Amino Acid Position:
777

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.3
0.55
1
64.9
39.3

Major BPS
60.4
0.26
1.6
69.7
44.2

Major PPT
91.6
0.94
0.7
84.6
36

Minor 5ss
42
-0.9
3.2
59.4
45.3

Minor BPS
37.4
-0.8
2.4
53.38
41.6

Associated Gene:

Gene:
ABCC8

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4472915 - 4546067
73153

4472915 - 4546067
73153

4472915 - 4546067
73153