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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4500360_4504405_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4500360 - 4504405

Intron Length:
4046

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGGTAT

5'SS Class:
strong_major

3'SS Sequence:
TTTGTTTTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTAAG

U12 Branch Point Sequence:
AAGCTGGGAACT

Flanking Amino Acid:
TSDSETGEDVRKRGSVAYAS

Intron Amino Acid Position:
765

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.6
0.79
0.9
77.4
33.4

Major BPS
60.4
0.26
1.6
69.7
44.2

Major PPT
91.6
0.94
0.7
84.6
36

Minor 5ss
44.5
-0.6
3.2
63.6
48.1

Minor BPS
37.4
-0.8
2.4
53.38
41.6

Associated Gene:

Gene:
ABCC8

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4472915 - 4546067
73153