Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_4508297_4508386_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4508297 - 4508386

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAAAT

5'SS Class:

major

3'SS Sequence:

CCCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

AAATCCGAAGCT

Flanking Amino Acid:

LSNIDIRIPQGQLTMIVGQV

Intron Amino Acid Position:

718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

74.2

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

81.6

0.71

0.7

75.8

26.2

Minor 5ss

33.4

-1.9

3.3

48.6

47.1

Minor BPS

-0.3

2.4

64.54

45.4

Associated Gene:

Gene:

ABCC8

Ensembl Gene ID:

ENSAPLG00000009025

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039181

4472915 - 4546067

73153

ENSAPLT00000030308

4472915 - 4546067

73153

ENSAPLT00000025423

4472915 - 4546067

73153

ENSAPLT00000009557

4472915 - 4546067

73153