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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4537886_4542563_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4537886 - 4542563

Intron Length:
4678

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTACGTTTT

5'SS Class:
strong_major

3'SS Sequence:
TCCCTCCTTACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AGCTGAT

U12 Branch Point Sequence:
CCCTCCTTACAG

Flanking Amino Acid:
ETSNFPKLLIALLFYWTLAF

Intron Amino Acid Position:
152

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.6
0.75
1
80.7
34.4

Major BPS
67.4
0.43
1.1
57.1
41.8

Major PPT
81.9
0.72
0.7
75.6
26.6

Minor 5ss
45.2
-0.5
3.1
63.7
43

Minor BPS
49.5
-0.1
1.9
51.73
48.5

Associated Gene:

Gene:
ABCC8

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4472915 - 4546067
73153

4472915 - 4546067
73153

4472915 - 4546067
73153

4472915 - 4546067
73153