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Intron Name: Anas_platyrhynchos_platyrhynchos_5_45780210_45782074_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
45780210 - 45782074

Intron Length:
1865

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGACA

5'SS Class:
strong_major

3'SS Sequence:
TGTTTTCTGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAC

U12 Branch Point Sequence:
TGTTTTCTGACA

Flanking Amino Acid:
AWHTLTLNIQGASASGLLNG

Intron Amino Acid Position:
750

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.8
0.96
0.8
81.4
32.1

Major BPS
86.6
0.91
0.8
77.7
36.7

Major PPT
79.8
0.67
1
76.5
37.7

Minor 5ss
32.5
-2
3.1
40.7
45.3

Minor BPS
57.6
0.23
1.6
71.22
34.4

Associated Gene:

Gene:
GALC

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

45780066 - 45818321
38256

45780066 - 45818321
38256

45780066 - 45818321
38256