Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_45789518_45791319_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45789518 - 45791319

Intron Length:

1802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAAGGC

5'SS Class:

major

3'SS Sequence:

TGTTTTGTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTGTTCTGATTT

Flanking Amino Acid:

YKVEAPIWITAHTTQFTQPG

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

62.7

36.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

77.9

0.63

0.9

77.1

37.1

Minor 5ss

24.7

-2.9

3.2

32.7

42.3

Minor BPS

57.2

0.3

1.7

76.09

41.1

Associated Gene:

Gene:

GALC

Ensembl Gene ID:

ENSAPLG00000003794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046908

45780066 - 45818321

38256

ENSAPLT00000031509

45780066 - 45818321

38256

ENSAPLT00000003925

45780066 - 45818321

38256