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Intron Name: Anas_platyrhynchos_platyrhynchos_5_45889099_45891266_F

Intron Information:

Intron Rank:

141137

Intron Class:

major

Intron Phase:

Intron Coordinates:

45889099 - 45891266

Intron Length:

2168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

TCCTCTGTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.1

36.5

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

76.5

0.6

0.9

69.5

41.5

Minor 5ss

39.8

-1.1

2.9

48.9

41.6

Minor BPS

47.2

-0.1

2.2

66.47

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020463

45888756 - 45891540

2785