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Intron Name: Anas_platyrhynchos_platyrhynchos_5_45907763_45909784_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
45907763 - 45909784

Intron Length:
2022

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATGACAT

5'SS Class:
strong_major

3'SS Sequence:
TCTTGTTGTAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTATTAATT

Flanking Amino Acid:
RVLSKKTKEEVGEIKAHAAE

Intron Amino Acid Position:
331

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83
0.78
0.9
73.4
37.3

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
69
0.43
1.1
70.2
39.4

Minor 5ss
39.7
-1.2
3.1
56
48.1

Minor BPS
76.9
0.92
1.4
92.73
28.9

Associated Gene:

Gene:
KCNK10

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

45907139 - 45958884
51746

45907139 - 45970198
63060