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Intron Name: Anas_platyrhynchos_platyrhynchos_5_45913301_45933953_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
45913301 - 45933953

Intron Length:
20653

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTAAGCTCT

5'SS Class:
major

3'SS Sequence:
TTCCATTTTCTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAATCAT

U12 Branch Point Sequence:
CTTTTGTTATTT

Flanking Amino Acid:
GIARVEKVFRKKQVSQTKIR

Intron Amino Acid Position:
221

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.7
0.49
1.1
66.1
40.7

Major BPS
80.4
0.76
1
80.3
31.8

Major PPT
80.2
0.68
0.8
73
37

Minor 5ss
47.8
-0.2
2.8
62.6
42.8

Minor BPS
49.8
0.07
2.3
74.56
43.3

Associated Gene:

Gene:
KCNK10

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

45907139 - 45958884
51746

45907139 - 45970198
63060