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Intron Name: Anas_platyrhynchos_platyrhynchos_5_45936757_45945552_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
45936757 - 45945552

Intron Length:
8796

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGGATG

5'SS Class:
strong_major

3'SS Sequence:
TTTTTCTTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTATAA

U12 Branch Point Sequence:
TAAGGCTGATTT

Flanking Amino Acid:
TQLELETLIQHAIDADNAGV

Intron Amino Acid Position:
128

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.3
0.74
1
73.4
43.3

Major BPS
54.9
0.12
1.2
53
42.8

Major PPT
96.2
1.04
0.5
92.4
17.6

Minor 5ss
34.5
-1.8
3.5
47.3
48.3

Minor BPS
42.7
-0.4
2.1
58.69
44.5

Associated Gene:

Gene:
KCNK10

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

45907139 - 45958884
51746

45907139 - 45970198
63060