Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_45945882_45970146_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45945882 - 45970146

Intron Length:

24265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGAA

5'SS Class:

major

3'SS Sequence:

CTTTGTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

TGGTTCTGAGTA

Flanking Amino Acid:

PRKQVNWDPQVTVPSPVPAC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

69.7

36.7

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

83.1

0.74

0.9

80.3

37.3

Minor 5ss

-2.6

3.1

31.6

42.8

Minor BPS

49.6

-0

1.7

60.54

39.8

Associated Gene:

Gene:

KCNK10

Ensembl Gene ID:

ENSAPLG00000009438

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009860

45907139 - 45970198

63060