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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46053419_46054249_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46053419 - 46054249

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGATCTCC

5'SS Class:

major

3'SS Sequence:

TCTCTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TTACTTGTAATC

Flanking Amino Acid:

IMIACLEHNEMLDIPRVLDM

Intron Amino Acid Position:

1144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

64.7

36.1

Major BPS

80.4

0.76

80.3

31.8

Major PPT

85.1

0.79

0.7

77.2

31.5

Minor 5ss

39.7

-1.2

2.9

51.4

45.3

Minor BPS

49.4

-0

1.9

63.67

36.3

Associated Gene:

Gene:

PTPN21

Ensembl Gene ID:

ENSAPLG00000008585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046700

46053290 - 46088500

35211

ENSAPLT00000008985

46053290 - 46085240

31951