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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46054411_46054948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46054411 - 46054948

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTCAACTCAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGTTGTTCAACT

Flanking Amino Acid:

GCPEDLKGFLSYLEEIQSVR

Intron Amino Acid Position:

1090

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

64.1

0.32

0.9

59.1

36.6

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

59.5

0.38

80.88

40.9

Associated Gene:

Gene:

PTPN21

Ensembl Gene ID:

ENSAPLG00000008585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046700

46053290 - 46088500

35211

ENSAPLT00000008985

46053290 - 46085240

31951