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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46055184_46055494_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46055184 - 46055494

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTATTGTAAAG

Flanking Amino Acid:

AIIAMVTAEEESGREKSFRY

Intron Amino Acid Position:

1012

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.5

28.2

Major BPS

100

1.24

0.5

100

Major PPT

79.3

0.66

83.4

Minor 5ss

32.3

-2

2.6

35.1

34.3

Minor BPS

47.5

-0.3

2.1

60.51

41.6

Associated Gene:

Gene:

PTPN21

Ensembl Gene ID:

ENSAPLG00000008585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046700

46053290 - 46088500

35211

ENSAPLT00000008985

46053290 - 46085240

31951